Peptide Database

Peptide NamePeptide chain B in PDB 2NMB

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length6 amino acids

Chemical FormulaC31H48N6O8

DescriptionStandard

        AYIGPL
    

Molecular Weight632.75 Da

Isoelectric Point (pI)5.57

Net Charge (pH 7.0)-0.21

Net Charge (pH 7.4) -0.39

Charge Density (pH 7.0) -0.0342

GRAVY Index1.13

Hydrophobic Moment 0.20

Boman Index0.65

Instability Index8.33

Aliphatic Index 146.67

Aromaticity 0.1667

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 220.26

LogP 0.02

H-bond Donors 7.0

H-bond Acceptors 8.0

Rotatable Bonds 16.0

Heavy Atoms 45.0

Ring Count 2.0

Amide Bonds 5.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0082526 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 2NMB receptor chain A

MethodProtein-peptide complex structure