Peptide Database

Peptide NameToxin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length404 amino acids

Chemical FormulaC1967H3072N542O585S7

DescriptionStandard

        MARNKDIPQVKNPPAGDGHHVTWRDMTAAELAEREAGQDAYDAMLARQEAFERSREVAAKKPQAVRAGSVFAKSCKLPDAIIDYGNPSGMVPTDSLRDYGELILLGAREADPSGGIPLKKISANAIPVGFGSLALAGSAFEALPALLSSATAAPLVGLVALLMPSSLGDSALYTDEQLSTLKQARTRVRLRVEQQADGGLKGYGFYTGKNRDWEMVDVVQFTARGDRFVADLGEGVELLWTPAVDGSDILGIPALEAAPQAPHIWVYPPTKAADWILVNPVYPPEYKDFILVFPADSGVKPIYTVVSSAKGTAEAGHTYHPAPETSDITAFPDLRRAKKKTPFNGGLRDRWINAKGRIIYEWDYLHGELEAYRASDGSHLGSYDHRTGEQIDPPKKNRSIKKYL
    

Molecular Weight43897.17 Da

Isoelectric Point (pI)6.11

Net Charge (pH 7.0)-3.76

Net Charge (pH 7.4) -4.51

Charge Density (pH 7.0) -0.0093

GRAVY Index-0.33

Hydrophobic Moment 0.68

Boman Index0.02

Instability Index34.84

Aliphatic Index 82.95

Aromaticity 0.0842

Extinction Coeff. Reduced 62340.00

Extinction Coeff. Oxidized 62340.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0409875 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. Choline-02u-1 [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal