Peptide Database

Peptide NameVicilin-like Antimicrobial peptide 2c-1 (MiAMP2c-1; Plant defensin)

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive

Antimicrobial ▸ Antifungal

Standard StatusStandard

Sequence Length45 amino acids

Chemical FormulaC239H399N93O75S5

DescriptionStandard

        RQRDPQQQYEQCQKRCQRRETEPRHMQICQQRCERRYEKEKRKQQ
    

Molecular Weight5935.63 Da

Isoelectric Point (pI)9.84

Net Charge (pH 7.0)6.82

Net Charge (pH 7.4) 6.49

Charge Density (pH 7.0) 0.1515

GRAVY Index-2.68

Hydrophobic Moment 0.62

Boman Index-0.96

Instability Index81.02

Aliphatic Index 8.67

Aromaticity 0.0444

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3230.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2916.77

LogP -36.50

H-bond Donors 105.0

H-bond Acceptors 88.0

Rotatable Bonds 215.0

Heavy Atoms 412.0

Ring Count 5.0

Amide Bonds 56.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0383895 VERIFIED: YES

Provenance & Taxonomy

OrganismMacadamia integrifolia [Plant]

FamilyDefensin

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibacterial Anti-Gram-positive Antifungal

TargetLeptosphaeria maculans

Activity25 μg/mL

MethodIC50

RECORD: Rec_0407981 VERIFIED: YES