Peptide Database

Peptide NamePeptide chain E in PDB 5NPI

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length11 amino acids

Chemical FormulaC50H83N13O21S

DescriptionStandard

        GENETDVMLLN
    

Molecular Weight1234.33 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-3.23

Net Charge (pH 7.4) -3.44

Charge Density (pH 7.0) -0.2939

GRAVY Index-0.45

Hydrophobic Moment 0.06

Boman Index0.03

Instability Index2.24

Aliphatic Index 97.27

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 572.63

LogP -6.29

H-bond Donors 18.0

H-bond Acceptors 19.0

Rotatable Bonds 42.0

Heavy Atoms 85.0

Ring Count 0.0

Amide Bonds 12.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0005464 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5NPI receptor chain B

MethodProtein-peptide complex structure