Peptide Database

Peptide NamePyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length513 amino acids

Chemical FormulaC2353H3751N681O733S14

DescriptionStandard

        MSYRPEVHGKGQAIHGDKTTTGATCITSCPEATVYGLGVIRSGDSTTPCPRCGKIGTVIEGDPRLSWHGRATAVDGCRVLCGCPPGSNRIIAPLGLMQIGTPPQQMASPAPTASPASSIAPAKLDQSRRTSETCVFAKSCVSVPLGSTDAGVQPEPASNFGSTTVLVTTQTLDSGATLLGRAGGTLAQGLGSWAISGGSAAGVSATGASGAATIGSAVTAAGLAGTVLLALWPRDLGDGTLYTPEQLAAQDRAASRVRFQFRRDSNGAVHVYGLHTRPGGGKDSVPITHARWDAGKSAMVADLGGISITWTPNDGPLATAPTATPGIPVNLNNLLVHPIPEGRDSQITTYPGQGLEDITWQDTIIVFPADSGVPPLYLVFAKPTVRLLEVGFYGSFDKRPRNGTHLDHIPSKKALERRLKDDSPDIETVDIKRALRNAASIAIPAWVHQQHSETYGARNTIDKQILDAANLRAAVDSNFDMIKPLLLKEGFSNTDLEAARTTLHELNQEQGWY
    

Molecular Weight53756.99 Da

Isoelectric Point (pI)6.86

Net Charge (pH 7.0)-0.49

Net Charge (pH 7.4) -1.53

Charge Density (pH 7.0) -0.0010

GRAVY Index-0.18

Hydrophobic Moment 0.81

Boman Index0.06

Instability Index37.02

Aliphatic Index 82.05

Aromaticity 0.0526

Extinction Coeff. Reduced 57410.00

Extinction Coeff. Oxidized 57910.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0042263 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. [Bacterium]

FamilyPyocin/Colicin

Tax ID306

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic Non-ribosomal