Peptide Database

Peptide NamePalustrin-3AR

Function Ontology

—

Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC120H200N34O41S3

DescriptionStandard

        SLVKGVGMKVFKAGLSNIGNTGCNEDEC
    

Molecular Weight2871.27 Da

Isoelectric Point (pI)5.90

Net Charge (pH 7.0)-0.56

Net Charge (pH 7.4) -0.80

Charge Density (pH 7.0) -0.0199

GRAVY Index-0.03

Hydrophobic Moment 0.53

Boman Index0.09

Instability Index23.32

Aliphatic Index 76.43

Aromaticity 0.0357

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 125.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1228.94

LogP -15.79

H-bond Donors 43.0

H-bond Acceptors 44.0

Rotatable Bonds 100.0

Heavy Atoms 198.0

Ring Count 1.0

Amide Bonds 30.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0065068 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)