Peptide Database

Peptide NamePeptide chain P in PDB 2JF9

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length13 amino acids

Chemical FormulaC68H102N18O21S

DescriptionStandard

        SPGSREWFKDMLS
    

Molecular Weight1539.71 Da

Isoelectric Point (pI)5.79

Net Charge (pH 7.0)-0.54

Net Charge (pH 7.4) -0.75

Charge Density (pH 7.0) -0.0413

GRAVY Index-0.94

Hydrophobic Moment 0.48

Boman Index-0.15

Instability Index34.72

Aliphatic Index 30.00

Aromaticity 0.1538

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 642.73

LogP -6.17

H-bond Donors 23.0

H-bond Acceptors 22.0

Rotatable Bonds 49.0

Heavy Atoms 108.0

Ring Count 4.0

Amide Bonds 12.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0000362 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 2JF9 receptor chain A

MethodProtein-peptide complex structure