Peptide Database

Peptide NamecAMP1088

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length46 amino acids

Chemical FormulaC238H386N72O68S3

DescriptionStandard

        KSHEKPCKFHEKPVDNGSRNKYTVKACQKRCVYYTIKKEVKQNANI
    

Molecular Weight5440.25 Da

Isoelectric Point (pI)9.72

Net Charge (pH 7.0)7.90

Net Charge (pH 7.4) 7.53

Charge Density (pH 7.0) 0.1718

GRAVY Index-1.31

Hydrophobic Moment 0.54

Boman Index-0.38

Instability Index36.84

Aliphatic Index 46.52

Aromaticity 0.0870

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4595.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2345.95

LogP -24.91

H-bond Donors 83.0

H-bond Acceptors 81.0

Rotatable Bonds 189.0

Heavy Atoms 381.0

Ring Count 8.0

Amide Bonds 51.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0106797 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial