Peptide Database

Peptide NameAGP25_ARATH

Function Ontology

Neurological / Signaling ▸ Signaling peptide

Standard StatusStandard

Sequence Length116 amino acids

Chemical FormulaC549H851N121O167S

DescriptionStandard

        DDGSGTIPSSPSPPDPDTNDGSYPDPLAFSPFASPPVSSPSPPPSLPSAGMAFSFLNKLLIIFIFIFISLSSSSPTISLVQQLSPEIAPLLPSPGDALPSVLLISLIISSASFLAL
    

Molecular Weight11850.41 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-7.23

Net Charge (pH 7.4) -7.44

Charge Density (pH 7.0) -0.0623

GRAVY Index0.48

Hydrophobic Moment 0.44

Boman Index0.34

Instability Index84.93

Aliphatic Index 105.17

Aromaticity 0.0776

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 4328.91

LogP -44.51

H-bond Donors 139.0

H-bond Acceptors 161.0

Rotatable Bonds 348.0

Heavy Atoms 838.0

Ring Count 30.0

Amide Bonds 119.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0214704 VERIFIED: NO

Provenance & Taxonomy

OrganismArabidopsis thaliana [Plant]

Tax ID3702

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Other ModsGlycosylation reported; GPI-anchor related processing reported

Bio-Activity Profile

Function

Signaling