Peptide Database

Peptide NamePeptide chain A in PDB 4D7Z

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length28 amino acids

Chemical FormulaC144H242N46O36S2

DescriptionStandard

        LVPRGSMIRTMLQGKLHRVKVTHADLHY
    

Molecular Weight3257.88 Da

Isoelectric Point (pI)11.00

Net Charge (pH 7.0)4.02

Net Charge (pH 7.4) 3.66

Charge Density (pH 7.0) 0.1436

GRAVY Index-0.21

Hydrophobic Moment 0.35

Boman Index-0.06

Instability Index21.94

Aliphatic Index 104.29

Aromaticity 0.0357

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1325.32

LogP -10.63

H-bond Donors 48.0

H-bond Acceptors 45.0

Rotatable Bonds 109.0

Heavy Atoms 228.0

Ring Count 5.0

Amide Bonds 28.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0224766 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 4D7Z receptor chain B

MethodProtein-peptide complex structure