Peptide Database

Peptide NameVv-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC115H193N39O43S4

DescriptionStandard

        RTCESQSNRFKGTCVSKSNCAAVCQTE
    

Molecular Weight2938.26 Da

Isoelectric Point (pI)8.53

Net Charge (pH 7.0)1.73

Net Charge (pH 7.4) 1.46

Charge Density (pH 7.0) 0.0640

GRAVY Index-0.69

Hydrophobic Moment 0.48

Boman Index-0.28

Instability Index28.80

Aliphatic Index 28.89

Aromaticity 0.0370

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1384.33

LogP -23.14

H-bond Donors 53.0

H-bond Acceptors 49.0

Rotatable Bonds 100.0

Heavy Atoms 201.0

Ring Count 1.0

Amide Bonds 30.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0027613 VERIFIED: YES

Provenance & Taxonomy

OrganismMalus pumila [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)