Peptide Database

Peptide NamePeptide chain C in PDB 1VGK

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length9 amino acids

Chemical FormulaC42H67N11O15S

DescriptionStandard

        SYVNTNMGL
    

Molecular Weight998.11 Da

Isoelectric Point (pI)5.24

Net Charge (pH 7.0)-0.54

Net Charge (pH 7.4) -0.75

Charge Density (pH 7.0) -0.0601

GRAVY Index-0.03

Hydrophobic Moment 0.09

Boman Index0.19

Instability Index-17.24

Aliphatic Index 75.56

Aromaticity 0.1111

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 442.99

LogP -5.56

H-bond Donors 15.0

H-bond Acceptors 16.0

Rotatable Bonds 31.0

Heavy Atoms 69.0

Ring Count 1.0

Amide Bonds 10.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0096013 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1VGK receptor chain A

MethodProtein-peptide complex structure