Peptide Database

Peptide NameVipericidin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length143 amino acids

Chemical FormulaC692H1105N185O218S7

DescriptionStandard

        METCLKILLLVGVVTAAPTSPASSLPSHEDAILAAVQVYNQEPGVTLAYRLLEAEPQPDWDVTSKTVQPLKFTIKETVCLISEKRDINQCDFKEDGLIKDCSGFFSTEQDPPSAMIKCEDASEEPDIVTRGRWGRFKRRAGGA
    

Molecular Weight15728.74 Da

Isoelectric Point (pI)4.82

Net Charge (pH 7.0)-6.43

Net Charge (pH 7.4) -6.81

Charge Density (pH 7.0) -0.0450

GRAVY Index-0.27

Hydrophobic Moment 0.64

Boman Index-0.00

Instability Index48.54

Aliphatic Index 83.22

Aromaticity 0.0629

Extinction Coeff. Reduced 13980.00

Extinction Coeff. Oxidized 14230.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 6445.74

LogP -65.04

H-bond Donors 224.0

H-bond Acceptors 220.0

Rotatable Bonds 518.0

Heavy Atoms 1102.0

Ring Count 22.0

Amide Bonds 150.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0016411 VERIFIED: NO

Provenance & Taxonomy

OrganismPelodiscus sinensis [Animal]

FamilyCathelicidin

Tax ID13735

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Non-hemolytic Non-ribosomal