Peptide Database

Peptide NameCollagen alpha-1(XII) chain isoform X1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length396 amino acids

Chemical FormulaC1963H3076N520O630S6

DescriptionStandard

        IVSVWYQFGYPTAYPRFWNFVTKNDWDNAIKELRNFYKNPKEQARGDLKRRNDETDIIEATIVKCNRSVDVVFLIDESGSVSLANFQESLDFVKNMTKAFPDEKLSGKDGTRFGLSTFSSSYRSHFYLSKYTKQSDYLSAISRVSYSGGSTYLGQALEEILTDQFTEERGLRPEVDGVPRILIVLTDGGASDDVSLPAKNVRDENIVIYAIGIGGYNLAQLKEIASSESHVYTLSTFTQLEVFISTLTSSTCYEPRPASLNETIITDVEKDTYQYFSYKQKTKILIIPARSIPDTRRKRSTDDDERTRQIYVSVTFDTESAQFKIEGNECNPLNCTEGTNEMPTPQPPTTQLPTTTTGTPSAVATTTTTKPTAAATPTTTTPKSSARVVIATKFVV
    

Molecular Weight44232.92 Da

Isoelectric Point (pI)5.42

Net Charge (pH 7.0)-5.05

Net Charge (pH 7.4) -5.53

Charge Density (pH 7.0) -0.0128

GRAVY Index-0.45

Hydrophobic Moment 0.72

Boman Index-0.04

Instability Index40.68

Aliphatic Index 74.09

Aromaticity 0.0985

Extinction Coeff. Reduced 43320.00

Extinction Coeff. Oxidized 43570.00

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Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0290581 VERIFIED: NO

Provenance & Taxonomy

OrganismParamuricea clavata [Animal]

Tax ID317549

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic Non-hemolytic Non-ribosomal