Peptide Database

Peptide NamePeptide chain B in PDB 5LXR

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length40 amino acids

Chemical FormulaC214H333N55O56S

DescriptionStandard

        RFKPGVISEELQDALGVTDKSLPPFIYRMRQLGYPPGWLK
    

Molecular Weight4604.33 Da

Isoelectric Point (pI)9.40

Net Charge (pH 7.0)1.76

Net Charge (pH 7.4) 1.55

Charge Density (pH 7.0) 0.0441

GRAVY Index-0.40

Hydrophobic Moment 0.48

Boman Index0.01

Instability Index48.77

Aliphatic Index 85.25

Aromaticity 0.1250

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1770.35

LogP -11.37

H-bond Donors 60.0

H-bond Acceptors 59.0

Rotatable Bonds 146.0

Heavy Atoms 326.0

Ring Count 11.0

Amide Bonds 41.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0285302 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5LXR receptor chain A

MethodProtein-peptide complex structure