Peptide Database

Peptide NamePeptide chain B in PDB 1NPQ

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length17 amino acids

Chemical FormulaC79H141N27O22S2

DescriptionStandard

        RMSADAMLRALLGSKHK
    

Molecular Weight1885.26 Da

Isoelectric Point (pI)11.00

Net Charge (pH 7.0)2.85

Net Charge (pH 7.4) 2.59

Charge Density (pH 7.0) 0.1674

GRAVY Index-0.29

Hydrophobic Moment 0.52

Boman Index-0.17

Instability Index55.52

Aliphatic Index 86.47

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 811.20

LogP -8.30

H-bond Donors 30.0

H-bond Acceptors 28.0

Rotatable Bonds 67.0

Heavy Atoms 130.0

Ring Count 1.0

Amide Bonds 16.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0080178 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1NPQ receptor chain A

MethodProtein-peptide complex structure