Peptide Database

Peptide NamePeptide chain X in PDB 5M3H

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length5 amino acids

Chemical FormulaC26H37N5O9

DescriptionStandard

        YSPTP
    

Molecular Weight563.60 Da

Isoelectric Point (pI)5.52

Net Charge (pH 7.0)-0.24

Net Charge (pH 7.4) -0.45

Charge Density (pH 7.0) -0.0482

GRAVY Index-1.20

Hydrophobic Moment 0.05

Boman Index0.05

Instability Index95.88

Aliphatic Index 0.00

Aromaticity 0.2000

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 222.83

LogP -2.33

H-bond Donors 7.0

H-bond Acceptors 9.0

Rotatable Bonds 11.0

Heavy Atoms 40.0

Ring Count 3.0

Amide Bonds 4.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0277642 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5M3H receptor chain A

MethodProtein-peptide complex structure