Peptide Database

Peptide NamePm-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length27 amino acids

Chemical FormulaC123H179N37O40S3

DescriptionStandard

        SYFDAWAGPGCNNRLERYSACGCTNVG
    

Molecular Weight2912.16 Da

Isoelectric Point (pI)5.78

Net Charge (pH 7.0)-0.57

Net Charge (pH 7.4) -0.82

Charge Density (pH 7.0) -0.0210

GRAVY Index-0.44

Hydrophobic Moment 0.47

Boman Index-0.00

Instability Index25.48

Aliphatic Index 36.30

Aromaticity 0.1481

Extinction Coeff. Reduced 8480.00

Extinction Coeff. Oxidized 8605.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1255.74

LogP -16.69

H-bond Donors 47.0

H-bond Acceptors 43.0

Rotatable Bonds 88.0

Heavy Atoms 203.0

Ring Count 6.0

Amide Bonds 29.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0171617 VERIFIED: YES

Provenance & Taxonomy

OrganismSelaginella moellendorffii [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)