Peptide Database

Peptide NamePSK5_ORYSJ

Function Ontology

Neurological / Signaling ▸ Signaling peptide

Standard StatusStandard

Sequence Length102 amino acids

Chemical FormulaC474H763N139O149S6

DescriptionStandard

        ATGNGDEVSELMGAAEEEAAGLCEEGNEECVERRMLRDAHLDYIYTQKRNMRPTGRRSSPPVAAALALLLLLVLFFFSHCASAARPLPASAAAELVLQDGRP
    

Molecular Weight10985.36 Da

Isoelectric Point (pI)4.94

Net Charge (pH 7.0)-5.03

Net Charge (pH 7.4) -5.39

Charge Density (pH 7.0) -0.0493

GRAVY Index-0.12

Hydrophobic Moment 0.64

Boman Index0.01

Instability Index65.70

Aliphatic Index 88.24

Aromaticity 0.0490

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3105.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 4587.64

LogP -48.10

H-bond Donors 161.0

H-bond Acceptors 152.0

Rotatable Bonds 360.0

Heavy Atoms 768.0

Ring Count 13.0

Amide Bonds 106.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0397769 VERIFIED: YES

Provenance & Taxonomy

OrganismOryza sativa subsp. Japonica [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Signaling