Peptide Database

Peptide NameS-type pyocin protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length182 amino acids

Chemical FormulaC884H1373N253O284S4

DescriptionStandard

        MKGEPLPGTSQMDIRDAIYVYPLNSGLPPVYVVFNSPYDGATTRGEHSGRMYDPEKAGGPTQNLDWTTASVTQDGIDLVKLHTGRFGASDANTIMIDRLEKILRGELVVTDTDKIFYTHELRELERYRALGVADGVQGNVWNNAHTAALEDYRINENRDFLYTEAAQSAGDRQDHADALRGL
    

Molecular Weight20217.14 Da

Isoelectric Point (pI)4.86

Net Charge (pH 7.0)-10.03

Net Charge (pH 7.4) -10.55

Charge Density (pH 7.0) -0.0551

GRAVY Index-0.56

Hydrophobic Moment 0.75

Boman Index-0.05

Instability Index19.60

Aliphatic Index 77.75

Aromaticity 0.0824

Extinction Coeff. Reduced 24410.00

Extinction Coeff. Oxidized 24410.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8667.53

LogP -98.15

H-bond Donors 299.0

H-bond Acceptors 283.0

Rotatable Bonds 662.0

Heavy Atoms 1425.0

Ring Count 30.0

Amide Bonds 196.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0222762 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas savastanoi pv. phaseolicola [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal