Peptide Database

Peptide NamePeptide chain A in PDB 5TN2

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length47 amino acids

Chemical FormulaC250H382N70O80S2

DescriptionStandard

        GSHMEYDGQLDSEWEKLVRDAMTSGVSKKQFREFLDYQKWRKSQKEE
    

Molecular Weight5712.26 Da

Isoelectric Point (pI)5.79

Net Charge (pH 7.0)-1.13

Net Charge (pH 7.4) -1.42

Charge Density (pH 7.0) -0.0241

GRAVY Index-1.46

Hydrophobic Moment 0.67

Boman Index-0.34

Instability Index31.86

Aliphatic Index 39.36

Aromaticity 0.1277

Extinction Coeff. Reduced 13980.00

Extinction Coeff. Oxidized 13980.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2511.20

LogP -24.58

H-bond Donors 88.0

H-bond Acceptors 82.0

Rotatable Bonds 201.0

Heavy Atoms 402.0

Ring Count 9.0

Amide Bonds 50.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0007328 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5TN2 receptor chain B

MethodProtein-peptide complex structure