Peptide Database

Peptide NameSD2

Function Ontology

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Standard StatusStandard

Sequence Length34 amino acids

Chemical FormulaC148H241N49O54S4

DescriptionStandard

        GPVTVEARTCASQSQRFKGKCVSDTNCENVCHNE
    

Molecular Weight3699.05 Da

Isoelectric Point (pI)6.75

Net Charge (pH 7.0)-0.18

Net Charge (pH 7.4) -0.50

Charge Density (pH 7.0) -0.0053

GRAVY Index-0.74

Hydrophobic Moment 0.54

Boman Index-0.22

Instability Index32.36

Aliphatic Index 40.00

Aromaticity 0.0294

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 250.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1705.38

LogP -26.11

H-bond Donors 62.0

H-bond Acceptors 59.0

Rotatable Bonds 123.0

Heavy Atoms 255.0

Ring Count 3.0

Amide Bonds 38.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0050310 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis thaliana [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)