Peptide Database

Peptide NamePeptide chain E in PDB 5VHS

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length33 amino acids

Chemical FormulaC172H248N46O64S

DescriptionStandard

        VWEDNWDDDNVEDDFSNQLRAELEKHGYKMETS
    

Molecular Weight4016.14 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-8.16

Net Charge (pH 7.4) -8.44

Charge Density (pH 7.0) -0.2473

GRAVY Index-1.55

Hydrophobic Moment 0.58

Boman Index-0.29

Instability Index23.66

Aliphatic Index 44.24

Aromaticity 0.1212

Extinction Coeff. Reduced 12490.00

Extinction Coeff. Oxidized 12490.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1832.30

LogP -18.72

H-bond Donors 61.0

H-bond Acceptors 58.0

Rotatable Bonds 135.0

Heavy Atoms 283.0

Ring Count 7.0

Amide Bonds 36.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0361024 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5VHS receptor chain Y

MethodProtein-peptide complex structure