Peptide Database

Peptide NameAc-AMP1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Standard StatusStandard

Sequence Length21 amino acids

Chemical FormulaC82H120N22O30S5

DescriptionStandard

        CASGLCCSQFGYCGSGSTYCG
    

Molecular Weight2054.28 Da

Isoelectric Point (pI)5.49

Net Charge (pH 7.0)-0.29

Net Charge (pH 7.4) -0.57

Charge Density (pH 7.0) -0.0139

GRAVY Index0.42

Hydrophobic Moment 0.19

Boman Index0.27

Instability Index11.06

Aliphatic Index 23.33

Aromaticity 0.1429

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3230.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 830.02

LogP -14.28

H-bond Donors 35.0

H-bond Acceptors 35.0

Rotatable Bonds 62.0

Heavy Atoms 139.0

Ring Count 3.0

Amide Bonds 21.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0343838 VERIFIED: YES

Provenance & Taxonomy

OrganismPinus monticola [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Anti-Gram-negative

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)