Peptide Database

Peptide NameSd1

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive

Antimicrobial ▸ Antifungal

Standard StatusStandard

Sequence Length49 amino acids

Chemical FormulaC223H358N70O69S9

DescriptionStandard

        RYCLSQSHRFKGLCMSSSNCANVCQTENFPGGECKADGATRKCFCKKIC
    

Molecular Weight5412.24 Da

Isoelectric Point (pI)8.91

Net Charge (pH 7.0)4.77

Net Charge (pH 7.4) 4.39

Charge Density (pH 7.0) 0.0973

GRAVY Index-0.45

Hydrophobic Moment 0.41

Boman Index-0.16

Instability Index51.18

Aliphatic Index 35.92

Aromaticity 0.0816

Extinction Coeff. Reduced 1490.00

Extinction Coeff. Oxidized 1990.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2285.00

LogP -31.09

H-bond Donors 88.0

H-bond Acceptors 84.0

Rotatable Bonds 183.0

Heavy Atoms 371.0

Ring Count 6.0

Amide Bonds 53.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0390473 VERIFIED: YES

Provenance & Taxonomy

OrganismSaccharum officinarum [Animal]

FamilyDefensin

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antifungal

TargetFusarium solani

Activity1-2 μM

MethodIC50

RECORD: Rec_0419297 VERIFIED: YES

Provenance & Taxonomy

OrganismInsecta [Animal]

Tax ID50557

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial

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