Peptide Database

Peptide NameJaponicin-1AM protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length51 amino acids

Chemical FormulaC256H413N71O84S3

DescriptionStandard

        GVVSLSLCEEERNADEEERRDDPEERDVEVEKRFLPPTLVGLAFCKLFKKC
    

Molecular Weight5925.64 Da

Isoelectric Point (pI)4.61

Net Charge (pH 7.0)-5.24

Net Charge (pH 7.4) -5.51

Charge Density (pH 7.0) -0.1028

GRAVY Index-0.69

Hydrophobic Moment 0.54

Boman Index-0.24

Instability Index64.83

Aliphatic Index 78.24

Aromaticity 0.0588

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 125.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2531.51

LogP -22.85

H-bond Donors 89.0

H-bond Acceptors 82.0

Rotatable Bonds 203.0

Heavy Atoms 414.0

Ring Count 6.0

Amide Bonds 51.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0347577 VERIFIED: NO

Provenance & Taxonomy

OrganismRana amurensis [Animal]

Tax ID109177

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Non-hemolytic Non-ribosomal