Peptide Database

Peptide NamePyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length510 amino acids

Chemical FormulaC2419H3797N655O751S13

DescriptionStandard

        MAFVIREGDPTTTGGKVVKGSTNTTVEYQKAARISDPVWCPKCSSMGFIAEGNPTVIDEFVAIATHGHAVQCGCPFGSNRLISTQTSTMAAEDVSVAIAPDFAAKAQAATHIWAQAISDGSYKSEFTAGIPTNNLSGYKPPKLCVFAKSCTVPAGSIDAGKGKEPADNFGKVAVLGAVGAPASVEAGSSGITYLGRIAGQLGTEGLGTWALRSAVTAGSVATGLLLAFLPRDIADGSLYTEEQLRGMSEAATRVRFQFRKDEKGETQVYGIHTAQSSGMASVPVVNAKWSADKQHIEAHVGGVTIIWTPNDGPVITAPSPYPGMSDELSKVLVHPIAEDTDTQVEIYPAENDITWQDCILVFPPKSGVPPLYIVFAKPAVNPLEVGVYKDLSNRSVKDTLDIDHITSQAALRTYIVDNFDNVTPEEIKYLLSQAPSIAIPQSVHRKYSETYAGRNVKAKQRLDASNLKAAVDSNFDAIKRGLLEEGYAEGDIEKAREELHNLHKEQGWYK
    

Molecular Weight54487.81 Da

Isoelectric Point (pI)5.55

Net Charge (pH 7.0)-10.54

Net Charge (pH 7.4) -11.55

Charge Density (pH 7.0) -0.0207

GRAVY Index-0.18

Hydrophobic Moment 0.67

Boman Index0.07

Instability Index34.41

Aliphatic Index 82.29

Aromaticity 0.0745

Extinction Coeff. Reduced 62340.00

Extinction Coeff. Oxidized 62715.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0236909 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas mandelii [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal