Peptide Database

Peptide NameS-type Pyocin domain-containing protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length603 amino acids

Chemical FormulaC2879H4561N803O881S24

DescriptionStandard

        MPGAARLNDIGSGHDCFPETPITEGSSDVIVNGQPAARQGDAVLLHGCPCPNAPHGVHSRKIAEGSSTVIINGKNAARIGDGIHCGGVITSGSGNVIIGDTPHRSPVQECAKQAALSRAPLLALTPMLAVEPVFAKSCLRGAGCTDAGKEEEPQGNIGEMSFYVAEPVEQANPSQEKSVEVKQYAQAAKKKNTSSAAVSPPQSFAGKNEPLPKTPPGAINKPQIPPMEPWYKTVFDLLVGKADAAMLPPPQQVVMAGTAAQAGAIAAAGGAVAQANQDAAKALTHQMKRLSGPSIWQGQLQMAQSFLLMGALIQHHLKGEKADLLTPEKLLEAANKQGTVPSRVRYQWMEDEETGRLKAVGYHTSMESGRDQVRVRLLKYDFPNNRYAFWEEGATGPTILWTPDNPGMELPTDTAHGEQPVIPSAVPGFEIPEMDDVSILATPMPEEKDFRDYILVFPENSFPPIYIYLSKLPVNLLDVDLYSNFIGRSRQGKYQADHMPSAAAVKAYLKRLYPDLRKDKLEKMAKEVAAIIIPTEIHQKISETYGGRNSADNIELDSQDLRGALDRNFDAIKPQLKEHGVTEEQLELARDKMHKLNEEQGLY
    

Molecular Weight65288.42 Da

Isoelectric Point (pI)5.75

Net Charge (pH 7.0)-11.16

Net Charge (pH 7.4) -12.41

Charge Density (pH 7.0) -0.0185

GRAVY Index-0.40

Hydrophobic Moment 0.70

Boman Index0.01

Instability Index50.34

Aliphatic Index 79.20

Aromaticity 0.0580

Extinction Coeff. Reduced 51340.00

Extinction Coeff. Oxidized 51715.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0154175 VERIFIED: NO

Provenance & Taxonomy

OrganismPectobacterium odoriferum [Bacterium]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Anti-Gram-negative Non-hemolytic Non-ribosomal

TargetEscherichia coli

MethodQualitative functional evidence