Peptide Database

Peptide NameType IV secretion protein Rhs

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length1480 amino acids

Chemical FormulaC7105H11029N2107O2218S19

DescriptionStandard

        MADGNPLVARAQSQTTGVTGIGIAESAVDLANGVKDGSWVEVGLGAVGVGMEALSMVVDPIGTLAQYGASWLIEHVQPLKEALDWLAGDPPVIQSFADTWGNVAGEVAAVAGDLRAEVTNGTAGWSGTGAEGYRGRVAEQTDALAGAATLADGISTGVMVMGQVVAMVRETVRDLVAELVGKLISWVLEEACTLGFATPLVAAQATTAITSTITKVSELVRKLLKTIGNVTPKIRRIVDKLGEIIEKLAKLGKKFARRADGATTPSAAHSLDTPQVHSPDAPHAPDTPDGADLPGASHPGDGTTPGSLKESSENPKTESREQECVPGSGDPIDVATGQMFSTEIDAELPGVLPLVFERTHYSSYRAGTWFGPSWTSTVDQRVEVEDDGIHFAAADGMRLVYPVPLTDGAEVLPIEGPRWPLTRTAEGYRITRLRDGCTLDFPGTTGRIPLATITDRGGRRIEFHYDETGAPAEIRHSGGYRLGIDTEGRRVTRLWLHNVAGEPITLMRYAYDDRGRLTEVVNSSNQATRFGYDLAGRITQWTDRNGEWYRYHFDGRGRCVRTEGSGGALTGTWDYDEENRVTIHTNSLGEATAHHLNELGQVVREVGPLGGETVREWDRHDRLLSITDPLGRTTRYTWDERGNLLATTLPDGTQRLTEYNELNLPTVLVDADGAVWRQDYDEAGNLVAVTDPVGAVTRYSYGESGFLTAVTDAHGQVRRIETDAAGLPLTVPDPSGVLVRCRRDQFGRLVEVADPAGGVVRLEWTVEGRLLSRTTPDGVTERWVHDGEGNEIRHVDPLGRVTTVETTHFDLVAAQILPDGSRYEFGYDTELKPVSVRNPQGLVWRYEYDRGGNLVRETDFDGRTTTYEHDAAGQVVARTNGAGETVRLVRDPLGRVAEEQFPDGTRATFTYDPVGRLVRAVNANAELVLGHDPIGRVVSETVNGRTVTSRYDALGRRTHRRTPTGAESAWSYDAEGRPTELRCAGRTLTFGYDAAGREVERLLDTGTILAQSWDGNNQLTTQTVSAVSRTAPPRVVQSRQYRYRPDGSIAEVEDLLSGVRRFEFDAASRLTGVQRNGYTERYNYDAAGNITGGAWPSADRRGQGPREYRGTLVERAGNVRYRYDGHGRLAVREAPGESGPWRYSWDAGDRLTAVTTPDGTVWRYSYDPMGRRIAKERLAPDGRTVVERVDFTWDGVTLAEEVRDGTSATTWNWGAGLRALTQTERLPLRDAPQQWVDQQFDSIVTDLVGSPAELVDPLGTVAWHNRGSVWGEQPAGGTPLRFPGQYFDAETGLHYNLFRYYDPSLGRYSSADPLGLGGGPNPYSYVPNPLQWIDPFGLKKCDPRDQPGTAHGSAGIPDVDGQWRRGSQRNAARFPGQVARQLEGRHFNNFDEFREAFWREVHADPNLRSQFPPGSQGNMANGHSPFVVDEQTFGGRSRYELHHVTPIQHGGGVYDMRNIVIVTPRYHRDILDPRYHYGNG
    

Molecular Weight162060.60 Da

Isoelectric Point (pI)5.35

Net Charge (pH 7.0)-40.29

Net Charge (pH 7.4) -42.66

Charge Density (pH 7.0) -0.0272

GRAVY Index-0.51

Hydrophobic Moment 0.87

Boman Index-0.05

Instability Index26.96

Aliphatic Index 74.11

Aromaticity 0.0811

Extinction Coeff. Reduced 262990.00

Extinction Coeff. Oxidized 263365.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0229418 VERIFIED: NO

Provenance & Taxonomy

OrganismAmycolatopsis bartoniae [Bacterium]

FamilyPyocin/Colicin

Tax ID941986

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Hydrolase Non-hemolytic Non-ribosomal