Peptide Database

Peptide NamePyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length187 amino acids

Chemical FormulaC913H1446N260O281S4

DescriptionStandard

        PERLDNLFVHPVAVGQDSAISHYPGRDAEDITWQDTIITFPADSGMSPLYLVFAKPMVSPLEVGRAADLMSRSRKDGLDIDHIPAQKVLEATLLQLDAKMPRQQVLDYLKNAPGIAIPTHVHQKHSETYGGRSTRAKQAKDVADLRAAVNSNVDAIKSGLLDEGYPEAEIEAAREQLHQLNQKQGWY
    

Molecular Weight20689.08 Da

Isoelectric Point (pI)5.61

Net Charge (pH 7.0)-5.40

Net Charge (pH 7.4) -5.86

Charge Density (pH 7.0) -0.0289

GRAVY Index-0.46

Hydrophobic Moment 0.69

Boman Index-0.03

Instability Index53.27

Aliphatic Index 88.24

Aromaticity 0.0588

Extinction Coeff. Reduced 19940.00

Extinction Coeff. Oxidized 19940.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 8664.63

LogP -101.23

H-bond Donors 293.0

H-bond Acceptors 286.0

Rotatable Bonds 684.0

Heavy Atoms 1458.0

Ring Count 32.0

Amide Bonds 203.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0351484 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. GW704-F2 [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal