Peptide Database

Peptide NameS-type Pyocin

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length409 amino acids

Chemical FormulaC1987H3158N564O588S11

DescriptionStandard

        MANNKDIPQVWRCYGTGTGGYRRLENMNERELAEREARQQAYEAMLARQEAYEARRKVEPPPTPLPMVGCVFAKSCNLPDALIDYNNPSGYLPLDRIGDYGEHVLLGGRETDSEGLLPLKKISGSALPAGLGTLALGGSAIGGASSVAAGAGTVAAGLMLGIAALIWPSSLGDSALYSDRQLRSMPRARTRVRLHVEQLANGTLKGYAFYTGKNRDWEMIDVVKFGLRGTHQVADLGDGIELIWTPAIDPAGTLGIPALEAAPQAPQIWVYPPTEKAASIIVDPIYPPEYRDFILVFPVDSGIRPLYIVVSLKYEDAPYHGKKDSSVKSKKPTNGLDALNNSVELNPPNSRRRIGIDPHTNEFVVIDRTSEGLYHGHVRRWSELRQEMKNALIKANKTDRKGKILGAEK
    

Molecular Weight44708.47 Da

Isoelectric Point (pI)8.54

Net Charge (pH 7.0)3.14

Net Charge (pH 7.4) 2.41

Charge Density (pH 7.0) 0.0077

GRAVY Index-0.35

Hydrophobic Moment 0.73

Boman Index-0.00

Instability Index36.01

Aliphatic Index 88.07

Aromaticity 0.0709

Extinction Coeff. Reduced 58330.00

Extinction Coeff. Oxidized 58455.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0234679 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas sp. GP01-A4 [Bacterium]

FamilyPyocin

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Antibiotic Bacteriocin Non-hemolytic Non-ribosomal

RECORD: Rec_0347759 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas fluorescens BBc6R8 [Bacterium]

FamilyPyocin/Colicin

Tax ID463794

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Non-hemolytic Non-ribosomal