Peptide Database

Peptide NamePREDICTED: alpha-defensin 5, Paneth cell-specific isoform X1 [Rattus norvegicus].

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length132 amino acids

Chemical FormulaC612H1029N185O188S12

DescriptionStandard

        MSVLRCLRCSCIPRSGQKSAVSLALLSVITLKDLRPTAMRTLTLLTALLLLALHTQAKSPQGTAEEAPDQEQLVMEDQDISISFGGDKGTALQDADVKAGVTCYCRSTRCGFRERLSGACGYRGRIYRLCCR
    

Molecular Weight14371.62 Da

Isoelectric Point (pI)8.97

Net Charge (pH 7.0)5.51

Net Charge (pH 7.4) 5.09

Charge Density (pH 7.0) 0.0418

GRAVY Index-0.02

Hydrophobic Moment 0.67

Boman Index-0.04

Instability Index40.13

Aliphatic Index 93.18

Aromaticity 0.0379

Extinction Coeff. Reduced 4470.00

Extinction Coeff. Oxidized 4970.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 6038.49

LogP -69.25

H-bond Donors 226.0

H-bond Acceptors 207.0

Rotatable Bonds 486.0

Heavy Atoms 997.0

Ring Count 10.0

Amide Bonds 138.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0310723 VERIFIED: NO

Provenance & Taxonomy

OrganismRattus norvegicus [Animal]

FamilyDefensin

Tax ID10116

Structure & Mods

ConfigSingle-chain peptide backbone represented as a linear sequence entry [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial