Peptide Database

Peptide NamePn-AMP1

Function Ontology

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Standard StatusStandard

Sequence Length39 amino acids

Chemical FormulaC156H243N49O57S8

DescriptionStandard

        QQCGSQAGGALCSNRLCCSKFGYCGSTDPYCGTGCQSQC
    

Molecular Weight3973.41 Da

Isoelectric Point (pI)7.69

Net Charge (pH 7.0)0.68

Net Charge (pH 7.4) 0.35

Charge Density (pH 7.0) 0.0174

GRAVY Index-0.29

Hydrophobic Moment 0.30

Boman Index-0.00

Instability Index24.48

Aliphatic Index 25.13

Aromaticity 0.0769

Extinction Coeff. Reduced 2980.00

Extinction Coeff. Oxidized 3480.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1726.16

LogP -29.75

H-bond Donors 67.0

H-bond Acceptors 66.0

Rotatable Bonds 128.0

Heavy Atoms 270.0

Ring Count 4.0

Amide Bonds 44.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0371209 VERIFIED: YES

Provenance & Taxonomy

OrganismAllium sativum [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

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TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)