Peptide Database

Peptide NamePeptide chain B in PDB 1YY6

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length8 amino acids

Chemical FormulaC30H46N8O15

DescriptionStandard

        DPGEGPST
    

Molecular Weight758.73 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-2.24

Net Charge (pH 7.4) -2.44

Charge Density (pH 7.0) -0.2795

GRAVY Index-1.56

Hydrophobic Moment 0.23

Boman Index-0.08

Instability Index23.40

Aliphatic Index 0.00

Aromaticity 0.0000

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 364.50

LogP -6.22

H-bond Donors 11.0

H-bond Acceptors 13.0

Rotatable Bonds 20.0

Heavy Atoms 53.0

Ring Count 2.0

Amide Bonds 7.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0283193 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1YY6 receptor chain A

MethodProtein-peptide complex structure