Peptide Database

Peptide NameCathelicidin-derived antimicrobial peptide 1d

Function Ontology

Antimicrobial

Standard StatusStandard

Sequence Length54 amino acids

Chemical FormulaC268H455N89O74S4

DescriptionStandard

        MKMKVQVRSLILLAVAVLQVRSRRSKVRICSRGKNCVSFNDEFIRDHSDGNRFA
    

Molecular Weight6236.29 Da

Isoelectric Point (pI)11.26

Net Charge (pH 7.0)7.57

Net Charge (pH 7.4) 7.26

Charge Density (pH 7.0) 0.1402

GRAVY Index-0.21

Hydrophobic Moment 0.63

Boman Index-0.20

Instability Index55.02

Aliphatic Index 93.70

Aromaticity 0.0556

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 125.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2719.61

LogP -29.59

H-bond Donors 101.0

H-bond Acceptors 87.0

Rotatable Bonds 219.0

Heavy Atoms 435.0

Ring Count 4.0

Amide Bonds 58.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0198855 VERIFIED: NO

Provenance & Taxonomy

OrganismOncorhynchus mykiss [Animal]

Familycathelicidin

Tax ID8022

Structure & Mods

ConfigSingle-chain peptide backbone represented as a linear sequence entry [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial