Peptide Database

Peptide NamepdBD-2

Function Ontology

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Standard StatusStandard

Sequence Length41 amino acids

Chemical FormulaC216H321N69O56S8

DescriptionStandard

        DPEMQYWTCGYRGLCRRFCYAQEYIVGHHGCPRRYRCCAMR
    

Molecular Weight5036.81 Da

Isoelectric Point (pI)8.90

Net Charge (pH 7.0)3.88

Net Charge (pH 7.4) 3.47

Charge Density (pH 7.0) 0.0946

GRAVY Index-0.75

Hydrophobic Moment 0.62

Boman Index-0.23

Instability Index22.66

Aliphatic Index 30.98

Aromaticity 0.1707

Extinction Coeff. Reduced 12950.00

Extinction Coeff. Oxidized 13325.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 2035.65

LogP -18.20

H-bond Donors 81.0

H-bond Acceptors 70.0

Rotatable Bonds 157.0

Heavy Atoms 349.0

Ring Count 12.0

Amide Bonds 42.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0230792 VERIFIED: YES

Provenance & Taxonomy

OrganismSiniperca chuatsi [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)