Peptide Database

Peptide NamePeptide chain P in PDB 5MHC

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length11 amino acids

Chemical FormulaC55H87N13O19S

DescriptionStandard

        KLMFKEGPDSD
    

Molecular Weight1266.42 Da

Isoelectric Point (pI)4.78

Net Charge (pH 7.0)-1.23

Net Charge (pH 7.4) -1.44

Charge Density (pH 7.0) -0.1122

GRAVY Index-1.15

Hydrophobic Moment 0.30

Boman Index-0.20

Instability Index-1.64

Aliphatic Index 35.45

Aromaticity 0.0909

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 529.70

LogP -4.51

H-bond Donors 17.0

H-bond Acceptors 19.0

Rotatable Bonds 43.0

Heavy Atoms 88.0

Ring Count 2.0

Amide Bonds 10.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0012665 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 5MHC receptor chain A

MethodProtein-peptide complex structure