Peptide Database

Peptide NamePeptide chain B in PDB 1GAG

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length13 amino acids

Chemical FormulaC56H86N14O19S2

DescriptionStandard

        PATGDFMNMSPVG
    

Molecular Weight1323.49 Da

Isoelectric Point (pI)4.05

Net Charge (pH 7.0)-1.04

Net Charge (pH 7.4) -1.10

Charge Density (pH 7.0) -0.0800

GRAVY Index0.01

Hydrophobic Moment 0.19

Boman Index0.27

Instability Index87.60

Aliphatic Index 30.00

Aromaticity 0.0769

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 0.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 510.59

LogP -6.44

H-bond Donors 17.0

H-bond Acceptors 20.0

Rotatable Bonds 39.0

Heavy Atoms 91.0

Ring Count 3.0

Amide Bonds 13.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0101580 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1GAG receptor chain A

MethodProtein-peptide complex structure