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MYP_001659
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Basic Information
Snakin-1
Antimicrobial
Antimicrobial ▸ Antibacterial
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-negative
Antimicrobial ▸ Antibacterial ▸ Anti-Gram-positive
Antimicrobial ▸ Antifungal
Immunology ▸ Innate immune defense ▸ Host defense peptide ▸ Host defense activity
Standard
63 amino acids
C284H465N87O89S12
Standard
Sequence
GSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP
Physicochemical Analysis
6907.04 Da
8.97
7.73
7.27
0.1226
-0.77
0.47
-0.27
40.49
32.54
0.0635
4470.00
5220.00
The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.
Residue Composition
Amino Acid Composition
Chemical Descriptors
2874.26
-37.84
113.0
110.0
236.0
472.0
8.0
64.0
Structural Visualization
3D PDB MODEL
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2D CHEMICAL STRUCTURE
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Experimental Records
RECORD: Rec_0187857 VERIFIED: YES
Provenance & Taxonomy
Solanum tuberosum [Plant]
Snakin
4113
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Cysteine-rich scaffold consistent with multiple disulfide bonds in the annotated family
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal
Fusarium oxysporum f. sp. lycopersici
20 μM
EC50
PMID11891250 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/11891250/
RECORD: Rec_0195362 VERIFIED: YES
Provenance & Taxonomy
Solanum tuberosum [Plant]
Snakin
4113
Structure & Mods
linear peptide [Linear]
canonical L-amino-acid peptide [L]
Cysteine-rich scaffold consistent with multiple disulfide bonds in the annotated family
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal
Ralstonia solanacearum (rfa-)
30 μM
EC50
PMID11891250 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/11891250/
RECORD: Rec_0195668 VERIFIED: YES
Provenance & Taxonomy
Solanum tuberosum [Plant]
Defensin
Structure & Mods
disulfide-constrained cyclic peptide [Cyclic]
canonical L-amino-acid peptide [L]
None
None
Disulfide bond(s) reported
Bio-Activity Profile
Antimicrobial Antibacterial Anti-Gram-positive Antifungal
Listeria monocytogenes
10 μg/mL
MIC
PMID11891250;9885189 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/11891250/
RECORD: Rec_0201639 VERIFIED: YES
Provenance & Taxonomy
Solanum tuberosum [Plant]
Defensin
Structure & Mods
disulfide-constrained cyclic peptide [Cyclic]
canonical L-amino-acid peptide [L]
None
None
Disulfide bond(s) reported
Bio-Activity Profile
Antimicrobial Antibacterial Anti-Gram-positive Antifungal
Colletotrichum graminicola
10 μM
EC50
PMID11891250;9885189 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/11891250/
RECORD: Rec_0202088 VERIFIED: YES
Provenance & Taxonomy
Solanum tuberosum [Plant]
Snakin
4113
Structure & Mods
Single-chain peptide backbone represented as a linear sequence entry [Linear]
canonical L-amino-acid peptide [L]
Bio-Activity Profile
Antimicrobial Antibacterial Antifungal Anti-Gram-positive Anti-Gram-negative
Plectosphaerella cucumerina
10 μM
EC50
PMID11891250 Evidence URLhttps://pubmed.ncbi.nlm.nih.gov/11891250/
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