Peptide Database

Peptide NameSo-D1

Function Ontology

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Standard StatusStandard

Sequence Length19 amino acids

Chemical FormulaC86H138N30O27S3

DescriptionStandard

        TCQSKSHRFKGPCVSTHNC
    

Molecular Weight2120.40 Da

Isoelectric Point (pI)9.15

Net Charge (pH 7.0)2.54

Net Charge (pH 7.4) 2.20

Charge Density (pH 7.0) 0.1337

GRAVY Index-0.89

Hydrophobic Moment 0.22

Boman Index-0.26

Instability Index19.26

Aliphatic Index 15.26

Aromaticity 0.0526

Extinction Coeff. Reduced 0.00

Extinction Coeff. Oxidized 125.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 936.96

LogP -14.72

H-bond Donors 36.0

H-bond Acceptors 35.0

Rotatable Bonds 68.0

Heavy Atoms 146.0

Ring Count 4.0

Amide Bonds 20.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0261873 VERIFIED: YES

Provenance & Taxonomy

OrganismArabidopsis thaliana [Plant]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)