Peptide Database

Peptide NameS-type pyocin domain-containing protein

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibiotic activity

Enzyme / Catalytic activity ▸ Hydrolase

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length421 amino acids

Chemical FormulaC2004H3109N559O608S7

DescriptionStandard

        MSGYVPNNRDERPAPKAEPYNGDFDRQPARTLVMDVQPEAPRQELQQAGCVFAKSCNLPDGVIDHRQPGNFIPLESLKTYGEWAVLATGSAIAATGTQLQLVGGSSSGTALASRLGGSIALGLAEGAATAGVIAGTALGSIAMLLPNNSLSPDSAYYTREQYAALNMGRTRARLNIKHLPDGSVDVYGFYTGGKASWENVPVIAALPRGDQFVADLGQGIELIWTPAADPNEVLGIPALEGAPALPAVWVYPPTDKSDQILVNPVHPSDYQDAIIWFPSTDIQPIYIALSLRDEPGVVTGQGKDVTGIWLADAGRELGAPIPSQIADQLRGRRFNSFDDFRRAFWTAVGGDPFLSGQFNERNAKDMAKGFSPVAPSSEHAGKRRAYELHHIEAISEGGAVYDVENLGVTTPKHHIELHKKG
    

Molecular Weight44984.96 Da

Isoelectric Point (pI)5.25

Net Charge (pH 7.0)-11.67

Net Charge (pH 7.4) -12.46

Charge Density (pH 7.0) -0.0277

GRAVY Index-0.24

Hydrophobic Moment 0.71

Boman Index0.07

Instability Index43.13

Aliphatic Index 83.52

Aromaticity 0.0784

Extinction Coeff. Reduced 57870.00

Extinction Coeff. Oxidized 57995.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0380402 VERIFIED: NO

Provenance & Taxonomy

OrganismPseudomonas mendocina [Bacterium]

FamilyPyocin/Colicin

Tax ID300

Structure & Mods

Configgene-encoded linear polypeptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antibiotic Antimicrobial Bacteriocin Hydrolase Non-hemolytic Non-ribosomal