Peptide Database

Peptide NameApo5 APOC1

Function Ontology

—

Standard StatusStandard

Sequence Length25 amino acids

Chemical FormulaC147H212N38O43S

DescriptionStandard

        FSEKTRNWFSEQFQKMKEKFNEQFS
    

Molecular Weight3231.55 Da

Isoelectric Point (pI)8.43

Net Charge (pH 7.0)0.77

Net Charge (pH 7.4) 0.55

Charge Density (pH 7.0) 0.0307

GRAVY Index-1.59

Hydrophobic Moment 0.48

Boman Index-0.35

Instability Index48.21

Aliphatic Index 0.00

Aromaticity 0.2400

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 1389.06

LogP -13.13

H-bond Donors 47.0

H-bond Acceptors 45.0

Rotatable Bonds 113.0

Heavy Atoms 229.0

Ring Count 7.0

Amide Bonds 29.0

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0247460 VERIFIED: YES

Provenance & Taxonomy

OrganismChrysemys picta [Animal]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

-

TargetEscherichia coli TOP10

MethodMex pooled growth assay (OD_ID at 4.5 h; Wald adjusted p-value)