Peptide Database

Peptide NameLysin A

Function Ontology

Antimicrobial

Antimicrobial ▸ Antibacterial ▸ Bacteriolytic activity ▸ Bacteriolytic enzyme

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length354 amino acids

Chemical FormulaC1719H2592N500O494S5

DescriptionStandard

        MADPIWLADVLRAAGLRCEIYPGAFNNGHGDFGNIWGVVAHHTGSNNASAGSIARHPSLGLASQLHLSRSGVYTLCGVGIAWHAGSGSWPGLPTNGANQYTIGIEAANDGTSGWPAAQYDAYVRGVAAILRRLGHNESRVIGHKEWGKVQGKWDPGGIDMNRFRADVKRHLSGAAAPAPKPVNLIDQYAADKKNAWIGKRVNPAKLSVEKVCPDGKGRWVEYENAHLYYHPSEGVHAIPHADPAITGSGLFETWGKDYRWEGGPLGYPVRDFTKLPDGAVQSFQGGVLYRKDGASQGFYVTGKIGDRWASEGYEKGPLGYPVSNEYPYDKVGRRQDFEHGSLLHHPSGAIKVER
    

Molecular Weight38326.35 Da

Isoelectric Point (pI)8.77

Net Charge (pH 7.0)4.89

Net Charge (pH 7.4) 3.73

Charge Density (pH 7.0) 0.0138

GRAVY Index-0.49

Hydrophobic Moment 0.81

Boman Index0.03

Instability Index30.24

Aliphatic Index 71.16

Aromaticity 0.1045

Extinction Coeff. Reduced 91330.00

Extinction Coeff. Oxidized 91455.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0125963 VERIFIED: NO

Provenance & Taxonomy

OrganismGordonia phage GodonK [Virus]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Bacteriolytic enzyme Non-hemolytic Non-ribosomal