Peptide Database

Peptide NamePeptide chain B in PDB 1JOT

Function Ontology

Binding / Molecular interaction ▸ Binding activity

Binding / Molecular interaction ▸ Protein-protein interaction

Standard StatusStandard

Sequence Length16 amino acids

Chemical FormulaC76H124N26O23

DescriptionStandard

        RNGKSQSIIVGPWGDR
    

Molecular Weight1769.96 Da

Isoelectric Point (pI)10.84

Net Charge (pH 7.0)1.76

Net Charge (pH 7.4) 1.56

Charge Density (pH 7.0) 0.1100

GRAVY Index-0.97

Hydrophobic Moment 0.22

Boman Index-0.20

Instability Index18.28

Aliphatic Index 66.88

Aromaticity 0.0625

Extinction Coeff. Reduced 5500.00

Extinction Coeff. Oxidized 5500.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

TPSA 820.58

LogP -10.20

H-bond Donors 29.0

H-bond Acceptors 25.0

Rotatable Bonds 58.0

Heavy Atoms 125.0

Ring Count 3.0

Amide Bonds 17.0

3D PDB MODEL

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2D CHEMICAL STRUCTURE

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RECORD: Rec_0108929 VERIFIED: YES

Provenance & Taxonomy

Organismnot reported [other]

Familyprotein-binding peptide

Structure & Mods

Configtopology not specified [Not included yet]

Chiralitystereochemistry not specified [Other]

Bio-Activity Profile

Function

Protein-binding Peptide-protein interaction Structural binding

TargetPDB 1JOT receptor chain A

MethodProtein-peptide complex structure