Peptide Database

Peptide NameLysin A

Function Ontology

Antimicrobial

Toxicity / Safety ▸ Negative safety assay result ▸ Non-hemolytic

Standard StatusStandard

Sequence Length581 amino acids

Chemical FormulaC2797H4229N783O815S15

DescriptionStandard

        MAYVSLSRPGSNFAGKPITRAIADRYRAAGVDIGAIFQYGKPQGTAPSDWTTGFEGGKRMAAQALRIARDAGMPGWCPIYFAVDENITLQQWNDTAVHFFRGAGEAIGVEWVGIYGHSRVCHWAIEDKVIGRSPKPGSGPWAWVTRAWSDDTGTGYAALYQRVIDTPSNPGPLVDGIRVDVNDVYAADWGQWSVDRTPNAGQPAPAPTAPGGPVDMARIGYGVTHTIPAGSDGPRRADDYVGVHTQEGGKGDAIGLANYCKNAGVSYNDAVDDVYTVRMMPPGNAPWAAVQANAVGYHVVLAGSFVSWSRDRWLSKDASDGLDEDAMLTRAARCVAAACQEFGIPVEWVGNNGATGWPQKRGICGHKDFGARGGGHTDPYPNFPIDEFMRRVRAFFAPPSPNLIDAEAKVAARWIGKRITGAATPTTTDDETPLFLDGKKVGAFARFESGHVYWRLGASAAFAIPAGGLFEAYAARDWERGLGFPVLRHQVVTTPISKVTAGVQSFEGGVLFTPVGGPVEGFVVHGEIGKRYAAMDWEQGPLGLPTSDERPVPNTDLIEQRFEFGKLTYVPTGVLVELVTN
    

Molecular Weight62344.23 Da

Isoelectric Point (pI)5.82

Net Charge (pH 7.0)-7.53

Net Charge (pH 7.4) -8.51

Charge Density (pH 7.0) -0.0130

GRAVY Index-0.24

Hydrophobic Moment 0.78

Boman Index0.08

Instability Index26.90

Aliphatic Index 70.74

Aromaticity 0.1067

Extinction Coeff. Reduced 132810.00

Extinction Coeff. Oxidized 133185.00

The radar chart summarizes major physicochemical dimensions for quick comparison, while exact numerical values remain listed on the left.

Amino Acid Composition

3D PDB MODEL

Drag to rotate. Click a residue or atom to inspect it; the selected residue is highlighted in amber in the current view mode. Use the buttons to zoom.

2D CHEMICAL STRUCTURE

Drag to move

Drag to move. Use the buttons to zoom.

RECORD: Rec_0125531 VERIFIED: NO

Provenance & Taxonomy

OrganismGordonia phage Vivi2 [Virus]

Structure & Mods

Configlinear peptide [Linear]

Chiralitycanonical L-amino-acid peptide [L]

Bio-Activity Profile

Function

Antimicrobial Non-hemolytic Non-ribosomal